Protein ZmOrphan175 | |
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Information | |
Orphans Name: | ZmOrphan175 |
Species: | Maize |
Orphans Family: | Orphans |
Gene Name(Synonym): | DBB12 |
Uniprot ID: | K7TR53 |
ZmOrphan175 is a protein in the Orphans family.
Overview of domains present in v5 transcripts | |
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PF00643 | |
Zm00001eb427600_T002 | |
Zm00001eb427600_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d025957 | DAPseq | sequence | fimo | position | |
Zm00001d025957 | DAPseq | sequence | fimo | position | |
Zm00001d025957 | ChIPseq | sequence | fimo | position | |
Zm00001d025957 | PChIPseq | sequence | fimo | position |
MKVQCDVCAAEAASVFCCADEAALCDACDDRVHRANKLAGKHRRFSLLHPCSSSAQKPPLCDICQERRGFLFCKEDRAIL
CRECDAPVHSANDMTRRHSRFLLTGVRLSSAPVDSADPSEGEEEEEQENSSRPGNGESCSGGAGATTATASDGSSISEYL
TKTLPGWHVEDFLVDDAYASDVGACSSDGLYQQGQQDGQISGVLQEAYMPWTGRELVPADVADERANWERWVPQMHAEFA
GDSKRPRASPSPPCSYW
MKVQCDVCAAEAASVFCCADEAALCDACDDRVHRANKLAGKHRRFSLLHPCSSSAQKPPLCDICQERRGFLFCKEDRAIL
CRECDAPVHSANDMTRRHSRFLLTGVRLSSAPVDSADPSEGEEEEEQENSSRPGNGESCSGGAGATTATASDGSSISEYL
TKTLPGWHVEDFLVDDAYASDVGACSSDGLYQQGQQDGQISGVLQEAYMPWTGRELVPADVADERANWERWVPQMHAEFA
GDSKRPRASPSPPCSYW
MKVQCDVCAAEAASVFCCADEAALCDACDDRVHRANKLAGKHRRFSLLHPCSSSAQKPPLCDICQERRGFLFCKEDRAIL
CRECDAPVHSANDMTRRHSRFLLTGVRLSSAPVDSADPSEGEEEEEQENSSRPGNGESCSGGAGATTATASDGSSISEYL
TKTLPGWHVEDFLVDDAYASDVGACSSDGLYQQGQQDGQISGVLQEAYMPWTGRELVPADVADERANWERWVPQMHAEFA
GDSKRPRASPSPPCSYW
MKVQCDVCAAEAASVFCCADEAALCDACDDRVHRANKLAGKHRRFSLLHPCSSSAQKPPLCDICQERRGFLFCKEDRAIL
CRECDAPVHSANDMTRRHSRFLLTGVRLSSAPVDSADPSEGEEEEEQENSSRPGNGESCSGGAGATTATASDGSSISEYL
TKTLPGWHVEDFLVDDAYASDVGACSSDGLYQQGQQDGQISGVLQEAYMPWTGRELVPADVADERANWERWVPQMHAEFA
GDSKRPRASPSPPCSYW
MKVQCDVCAAEAASVFCCADEAALCDACDDRVHRANKLAGKHRRFSLLHPCSSSAQKPPLCDICQERRGFLFCKEDRAIL
CRECDAPVHSANDMTRRHSRFLLTGVRLSSAPVDSADPSEGEEEEEQENSSRPGNGESCSGGAGATTATASDGSSISEYL
TKTLPGWHVEDFLVDDAYASDVGACSSDGLYQQGQQDGQISGVLQEAYMPWTGRELVPADVADERANWERWVPQMHAEFA
GDSKRPRASPSPPCSYW
MKVQCDVCAAEAASVFCCADEAALCDACDDRVHRANKLAGKHRRFSLLHPCSSSAQKPPLCDICQERRGFLFCKEDRAIL
CRECDAPVHSANDMTRRHSRFLLTGVRLSSAPVDSADPSEGEEEEEQENSSRPGNGESCSGGAGATTATASDGSSISEYL
TKTLPGWHVEDFLVDDAYASDVGACSSDGLYQQGQQDGQISGVLQEAYMPWTGRELVPADVADERANWERWVPQMHAEFA
GDSKRPRASPSPPCSYW
Secondary Structure Color Code | |
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BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF00643 |
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PF00643 |
|
Hover here to show all domains |
AGTTCCTTCGGTTGCTAACATCTCT...
AGTTCCTTCGGTTGCTAACATCTCTAGCCGAGACATTTGACTTGGACAATCTGCTCATCTACCACTCCGGCACTCCCACGCCGGGCCGCGCGGATCGCATCGAGTTTGAGTGGAGTAGGCGGCGGGCAGCGAATCAGCGATGAAGGTGCAGTGCGACGTGTGCGCGGCCGAGGCGGCCTCCGTCTTCTGCTGTGCCGACGAGGCCGCGCTGTGCGACGCGTGCGACGACCGCGTCCACCGCGCCAACAAGCTCGCGGGGAAGCACCGCCGCTTCTCCCTCCTCCACCCCTGTTCGTCCTCTGCGCAGAAGCCGCCGCTCTGCGACATCTGCCAGGAGCGGAGAGGCTTCTTGTTCTGCAAGGAGGACAGGGCGATCCTGTGCCGGGAGTGCGACGCGCCGGTGCACAGCGCGAACGACATGACGAGGCGGCACAGCCGGTTCCTGCTCACCGGCGTGCGCCTCTCGTCGGCGCCGGTGGACTCTGCTGACCCATCAGAAGGGGAGGAGGAGGAGGAGCAGGAGAACAGCAGCAGGCCCGGCAACGGTGAGTCCTGCAGCGGCGGCGCCGGCGCGACCACGGCGACCGCTAGCGACGGGAGCAGCATCTCCGAGTACCTGACCAAGACCCTGCCCGGGTGGCACGTCGAGGATTTCCTCGTTGACGACGCGTACGCCAGCGACGTCGGCGCCTGCTCATCAGACGGGCTTTATCAGCAGGGACAACAAGATGGACAGATCAGCGGGGTGCTGCAAGAAGCTTACATGCCGTGGACGGGGCGGGAGCTGGTGCCCGCTGACGTCGCAGACGAGCGGGCCAACTGGGAGCGGTGGGTGCCGCAGATGCACGCGGAGTTCGCCGGCGACAGCAAGCGGCCCAGAGCGTCGCCTTCGCCTCCCTGTTCGTACTGGTGAAAAGCTCGCCGTTACCCGTTATTAGTAGAGTTGATTTACTGGGTACCGTAGGAACGAAGAGAAATATGAGCCAAAAAAAATCATGGAACGGACCGGTGTTTCTCTGTTGGATTATTATTGGGTCCATTTCGATCGAGCTGCTTTAAGGTGACGTTTGGTTCATAAAATGTAACGTAAATAACAATAATAACGATTGACCCTCGAGTGACAGCGGTAATAAGTTTAAATAGGCCGATACCAGTTTTTAATATGAGAT
MKVQCDVCAAEAASVFCCADEAALCDACDDRVHRANKLAGKHRRFSLLHPCSSSAQKPPLCDICQERRGFLFCKEDRAIL
CRECDAPVHSANDMTRRHSRFLLTGVRLSSAPVDSADPSEGEEEEEQENSSRPGNGESCSGGAGATTATASDGSSISEYL
TKTLPGWHVEDFLVDDAYASDVGACSSDGLYQGQQDGQISGVLQEAYMPWTGRELVPADVADERANWERWVPQMHAEFAG
DSKRPRASPSPPCSYW
AGTTCCTTCGGTTGCTAACATCTCT...
AGTTCCTTCGGTTGCTAACATCTCTAGCCGAGACATTTGACTTGGACAATCTGCTCATCTACCACTCCGGCACTCCCACGCCGGGCCGCGCGGATCGCATCGAGTTTGAGTGGAGTAGGCGGCGGGCAGCGAATCAGCGATGAAGGTGCAGTGCGACGTGTGCGCGGCCGAGGCGGCCTCCGTCTTCTGCTGTGCCGACGAGGCCGCGCTGTGCGACGCGTGCGACGACCGCGTCCACCGCGCCAACAAGCTCGCGGGGAAGCACCGCCGCTTCTCCCTCCTCCACCCCTGTTCGTCCTCTGCGCAGAAGCCGCCGCTCTGCGACATCTGCCAGGAGCGGAGAGGCTTCTTGTTCTGCAAGGAGGACAGGGCGATCCTGTGCCGGGAGTGCGACGCGCCGGTGCACAGCGCGAACGACATGACGAGGCGGCACAGCCGGTTCCTGCTCACCGGCGTGCGCCTCTCGTCGGCGCCGGTGGACTCTGCTGACCCATCAGAAGGGGAGGAGGAGGAGGAGCAGGAGAACAGCAGCAGGCCCGGCAACGGTGAGTCCTGCAGCGGCGGCGCCGGCGCGACCACGGCGACCGCTAGCGACGGGAGCAGCATCTCCGAGTACCTGACCAAGACCCTGCCCGGGTGGCACGTCGAGGATTTCCTCGTTGACGACGCGTACGCCAGCGACGTCGGCGCCTGCTCATCAGACGGGCTTTATCAGGGACAACAAGATGGACAGATCAGCGGGGTGCTGCAAGAAGCTTACATGCCGTGGACGGGGCGGGAGCTGGTGCCCGCTGACGTCGCAGACGAGCGGGCCAACTGGGAGCGGTGGGTGCCGCAGATGCACGCGGAGTTCGCCGGCGACAGCAAGCGGCCCAGAGCGTCGCCTTCGCCTCCCTGTTCGTACTGGTGAAAAGCTCGCCGTTACCCGTTATTAGTAGAGTTGATTTACTGGGTACCGTAGGAACGAAGAGAAATATGAGCCAAAAAAAATCATGGAACGGACCGGTGTTTCTCTGTTGGATTATTATTGGGTCCATTTCGATCGAGCTGCT
MKVQCDVCAAEAASVFCCADEAALCDACDDRVHRANKLAGKHRRFSLLHPCSSSAQKPPLCDICQERRGFLFCKEDRAIL
CRECDAPVHSANDMTRRHSRFLLTGVRLSSAPVDSADPSEGEEEEEQENSSRPGNGESCSGGAGATTATASDGSSISEYL
TKTLPGWHVEDFLVDDAYASDVGACSSDGLYQGQQDGQISGVLQEAYMPWTGRELVPADVADERANWERWVPQMHAEFAG
DSKRPRASPSPPCSYW
AGTTCCTTCGGTTGCTAACATCTCT...
AGTTCCTTCGGTTGCTAACATCTCTAGCCGAGACATTTGACTTGGACAATCTGCTCATCTACCACTCCGGCACTCCCACGCCGGGCCGCGCGGATCGCATCGAGTTTGAGTGGAGTAGGCGGCGGGCAGCGAATCAGCGATGAAGGTGCAGTGCGACGTGTGCGCGGCCGAGGCGGCCTCCGTCTTCTGCTGTGCCGACGAGGCCGCGCTGTGCGACGCGTGCGACGACCGCGTCCACCGCGCCAACAAGCTCGCGGGGAAGCACCGCCGCTTCTCCCTCCTCCACCCCTGTTCGTCCTCTGCGCAGAAGCCGCCGCTCTGCGACATCTGCCAGGAGCGGAGAGGCTTCTTGTTCTGCAAGGAGGACAGGGCGATCCTGTGCCGGGAGTGCGACGCGCCGGTGCACAGCGCGAACGACATGACGAGGCGGCACAGCCGGTTCCTGCTCACCGGCGTGCGCCTCTCGTCGGCGCCGGTGGACTCTGCTGACCCATCAGAAGGGGAGGAGGAGGAGGAGCAGGAGAACAGCAGCAGGCCCGGCAACGGTGAGTCCTGCAGCGGCGGCGCCGGCGCGACCACGGCGACCGCTAGCGACGGGAGCAGCATCTCCGAGTACCTGACCAAGACCCTGCCCGGGTGGCACGTCGAGGATTTCCTCGTTGACGACGCGTACGCCAGCGACGTCGGCGCCTGCTCATCAGACGGGCTTTATCAGGGACAACAAGATGGACAGATCAGCGGGGTGCTGCAAGAAGCTTACATGCCGTGGACGGGGCGGGAGCTGGTGCCCGCTGACGTCGCAGACGAGCGGGCCAACTGGGAGCGGTGGGTGCCGCAGATGCACGCGGAGTTCGCCGGCGACAGCAAGCGGCCCAGAGCGTCGCCTTCGCCTCCCTGTTCGTACTGGTGAAAAGCTCGCCGTTACCCGTTATTAGTAGAGTTGATTTACTGGGTACCGTAGGAACGAAGAGAAATATGAGCCAAAAAAAATCATGGAACGGACCGGTGTTTCTCTGTTGGATTATTATTGGGTCCATTTCGATCGAGCT
MKVQCDVCAAEAASVFCCADEAALCDACDDRVHRANKLAGKHRRFSLLHPCSSSAQKPPLCDICQERRGFLFCKEDRAIL
CRECDAPVHSANDMTRRHSRFLLTGVRLSSAPVDSADPSEGEEEEEQENSSRPGNGESCSGGAGATTATASDGSSISEYL
TKTLPGWHVEDFLVDDAYASDVGACSSDGLYQGQQDGQISGVLQEAYMPWTGRELVPADVADERANWERWVPQMHAEFAG
DSKRPRASPSPPCSYW
AGTTCCTTCGGTTGCTAACATCTCT...
AGTTCCTTCGGTTGCTAACATCTCTAGCCGAGACATTTGACTTGGACAATCTGCTCATCTACCACTCCGGCACTCCCACGCCGGGCCGCGCGGATCGCATCGAGTTTGAGTGGAGTAGGCGGCGGGCAGCGAATCAGCGATGAAGGTGCAGTGCGACGTGTGCGCGGCCGAGGCGGCCTCCGTCTTCTGCTGTGCCGACGAGGCCGCGCTGTGCGACGCGTGCGACGACCGCGTCCACCGCGCCAACAAGCTCGCGGGGAAGCACCGCCGCTTCTCCCTCCTCCACCCCTGTTCGTCCTCTGCGCAGAAGCCGCCGCTCTGCGACATCTGCCAGGAGCGGAGAGGCTTCTTGTTCTGCAAGGAGGACAGGGCGATCCTGTGCCGGGAGTGCGACGCGCCGGTGCACAGCGCGAACGACATGACGAGGCGGCACAGCCGGTTCCTGCTCACCGGCGTGCGCCTCTCGTCGGCGCCGGTGGACTCTGCTGACCCATCAGAAGGGGAGGAGGAGGAGGAGCAGGAGAACAGCAGCAGGCCCGGCAACGGTGAGTCCTGCAGCGGCGGCGCCGGCGCGACCACGGCGACCGCTAGCGACGGGAGCAGCATCTCCGAGTACCTGACCAAGACCCTGCCCGGGTGGCACGTCGAGGATTTCCTCGTTGACGACGCGTACGCCAGCGACGTCGGCGCCTGCTCATCAGACGGGCTTTATCAGGGACAACAAGATGGACAGATCAGCGGGGTGCTGCAAGAAGCTTACATGCCGTGGACGGGGCGGGAGCTGGTGCCCGCTGACGTCGCAGACGAGCGGGCCAACTGGGAGCGGTGGGTGCCGCAGATGCACGCGGAGTTCGCCGGCGACAGCAAGCGGCCCAGAGCGTCGCCTTCGCCTCCCTGTTCGTACTGGTGAAAAGCTCGCCGTTACCCGTTATTAGTAGAGTTGATTTACTGGGTACCGTAGGAACGAAGAGAAATATGAGCCAAAAAAAATCATGGAACGGACCGGTGTTTCTCTGTTGGATTATTATTGGGTCCATTTCGATCGAGCTGCTTTAAGGTGACGTTTGGTTCATAAAATGTAACGTAAATAACAATAATAACGATTGACCCTCGAGTGACAGCGGTAATAAGTTTAAATAGGCCGATACCAGTTTTTAATATGAGAT
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